BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009A09SP1|AL425968
(788 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig436 905 0.0
>3x_Contig436
Length = 1820
Score = 905 bits (455), Expect = 0.0
Identities = 468/475 (98%)
Strand = Plus / Plus
Query: 314 atatttcaattcaacgtatgatattaagaccggcaaaataaaccagcatatggcgaattg 373
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5 atatttcaattcaacgtatgatattaacaccggcaaaataaaccagcatatggcgaattg 64
Query: 374 cgaccaatataaggaggtccataagaaatgaaagtttggtgcagtctctagcgcagacga 433
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 65 cgaccaatataaggaggtccataagacatgaaagtttggtgcagtctctagcgcagacga 124
Query: 434 taatggtgatatgtcgtcccttgcagagagtgtagaattgatggggttaggttgcccaat 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 taatggtgatatgtcgtcccttgcagagagtgtagaattgatggggttaggttgcccaat 184
Query: 494 gccagaactctgagcagcacaaaaaacatccaatggaagtvagtwtgcgatggagagtaa 553
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 185 gccagaactctgagcagcacaaaaaacatccaatggaagtaagtatgcgatggagagtaa 244
Query: 554 gaggaacatattaagcaatagcacaaataaggtggctggataattgttcttataaagttt 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gaggaacatattaagcaatagcacaaataaggtggctggataattgttcttataaagttt 304
Query: 614 gaacgataaaacccgattgacaaagtaaaaagcagccacagccatgaatataactgcmag 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 305 gaacgataaaacccgattgacaaagtaaaaagcagccacagccatgaatataactgcaag 364
Query: 674 ttaaagcagtagccatagtgctctcattggatatttttcaagtccttgtctggrctacca 733
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 365 taaaagcagtagccatagtgctctcattggatatttttcaagtccttgtctggactacca 424
Query: 734 acaaacacaccggtcaatgttttcaaagtcttactgatttacacccttgcttccg 788
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 acaaacacaccggtcaatgttttcaaagtcttactgatttacacccttgcttccg 479
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5565
Number of Sequences: 1807
Number of extensions: 5565
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 788
length of database: 10,358,551
effective HSP length: 16
effective length of query: 772
effective length of database: 10,329,639
effective search space: 7974481308
effective search space used: 7974481308
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)